Dashboard > BinBase > ... > Basic understanding how the BinBase works > BinBase Features

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BinBase Features

Features

feature available core feature
optional feature custom feature comment
high performance clustering

  we also provide a solution which runs without a cluster
fatty acid methyl ester based retention index correction  
The BinBase default installation comes with a couple standard defined, which are run on a RTX5 column
kovatch retention index based retention index correction
 
automated library generation
     
central configuration    
linking with external resources
   
replacing of empty values



 
support for GC-Tof with leco pegasus 3.0


     
support for GC-Tof with leco pegasus 2.*      
support for quadrupole
 
GCxGC support
 
import msp files as reference library

   
export of msp files
     
LGPL compatible
   
highly customizable matching of samples      
integration with setupX
   
integration with external LIMS systems
 
possible to access using web services
     
multi user support
    the samples are not associated with a user at the given time,since this is the job of a lims system
based on meta informations for a smarter matching and bin generation      
possible to compare different species against each other
     
fully automated
     
tested in production environments
     
support for large databases
     
retention index correction based on internal standards

   
retention index correction based on external standards
 
quantification based on the height of peaks
     
quantification based on the area of peaks

 
tools available to browse the database online



 
tools available to import/export massspecs online




we are currently writing a small webfrontend to make it easy to work with BinBase without setupX

Explanations

  • core feature - is enabled and shouldn't be disabled, since BinBase needs this component to work
  • optional feature - can be disabled and is not really needed
  • custom feature - can be implemented by an external contractor or programmer, but is currently not available and not needed by us.

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